What's the difference between helix and vortex?

Helix


Definition:

  • (n.) A nonplane curve whose tangents are all equally inclined to a given plane. The common helix is the curve formed by the thread of the ordinary screw. It is distinguished from the spiral, all the convolutions of which are in the plane.
  • (n.) A caulicule or little volute under the abacus of the Corinthian capital.
  • (n.) The incurved margin or rim of the external ear. See Illust. of Ear.
  • (n.) A genus of land snails, including a large number of species.

Example Sentences:

  • (1) The presence of a few key residues in the amino-terminal alpha-helix of each ligand is sufficient to confer specificity to the interaction.
  • (2) The elongation of helix III with the addition of helix II at the N-terminus somewhat stabilizes the ordered structure.
  • (3) The C-terminal sequence contains an amphiphilic alpha-helix of four turns which lies on the surface of the beta-barrel.
  • (4) The chiral intercalators, at micromolar concentrations, inhibit the reaction of EcoRI, but for each enantiomeric pair it is the lambda enantiomer, which binds only poorly to a B-DNA helix, that inhibits EcoRI preferentially.
  • (5) The melting profile exhibited two transitions--one at about 35 degrees C and one above 50 degrees C. Our spectral data showed that helices I and II were stable during the first transition, and agreed with other data that helix III was the most likely helix to have melted.
  • (6) The helix axes, penetrating the hydrophobic region of the bilayers, were oriented neither parallel nor perpendicular to the membrane normal.
  • (7) The structure of the Z-helix antigen was confirmed by circular dichroism (CD) and U.V.
  • (8) Conformational predictions based on these sequences confirm their structural homology and indicate the probable existence of two beta-turns, one beta-chain and a long alpha-helix in them.
  • (9) The nogalose and aminoglucose sugars lie in the minor and major grooves, respectively, of the distorted B-DNA double helix.
  • (10) The latter, which is external and solvent accessible, is associated with a distortion in the alpha-helix centered around Tyr33 which consists of a significant increase in the CO(i-4)-N(i) and CO(i-4)-NH(i) distances relative to those in the rest of the helix, as well as a significant departure in the phi, psi angles of Tyr33 relative to regular helical geometry.
  • (11) The AFB1 moiety is face-stacked in the major groove with its long axis approximately perpendicular to the helix axis.
  • (12) MP8 also was conformed as an alpha-helix, but was amphipatic in the sense that the N-terminal half of the molecule was hydrophilic and the C-terminal half hydrophobic.
  • (13) A lectin, Helix pomatia agglutinin (HPA), was planted at the surface of rat GEN by the perfusion of the isolated left kidney with neuraminidase (NRD) and HPA.
  • (14) As a basis for the discussion a possible structure for the DNA complex of the phenylated neutral red is considered in which the extra phenyl ring at N-5 of the phenazinium system, protrudes into the large groove of the DNA helix while the tricyclic part of the ligand is inserted between the DNA base-pairs.
  • (15) The opsin mutations included reversal of a charged pair conserved in all G protein-coupled receptors at the cytoplasmic border of the third transmembrane helix (mutant CD1), replacement of 13 amino acids in the second cytoplasmic loop (mutant CD2), and deletion of 13 amino acids from the third cytoplasmic loop (mutant EF1).
  • (16) The remaining 26 independently isolated second-site suppressor mutations all mapped within the amino-terminal DNA binding domain of LexA, at positions 22 (situated in the turn between helix 1 and helix 2) and positions 57, 59, 62, 71 and 73.
  • (17) In subsequent steps, unassociated Y' directs the synthesis of the complementary oligopurine (R') strand forming a new double helix Y'R' that may direct the synthesis of an oligopyrimidine strand, Y, that is expected to be identical to the first strand that started the whole sequence.
  • (18) Z-DNA antigen was prepared against poly(dG-dC).poly(dG-dC), which had been converted to the Z-helix conformation in high salt and then stabilized by bromination.
  • (19) Incubation and heating of the polymers in 1 mM Mn2+ caused the spectral shift reported for the left-handed Z-DNA conformation in the alternating copolymer and the change reported for the triple helix in the homopolymer.
  • (20) To investigate the ability of a protein to accommodate potentially destabilizing amino acid substitutions, and also to investigate the steric requirements for catalysis, proline was substituted at different sites within the long alpha-helix that connects the amino-terminal and carboxyl-terminal domains of T4 lysozyme.

Vortex


Definition:

  • (n.) A mass of fluid, especially of a liquid, having a whirling or circular motion tending to form a cavity or vacuum in the center of the circle, and to draw in towards the center bodies subject to its action; the form assumed by a fluid in such motion; a whirlpool; an eddy.
  • (n.) A supposed collection of particles of very subtile matter, endowed with a rapid rotary motion around an axis which was also the axis of a sun or a planet. Descartes attempted to account for the formation of the universe, and the movements of the bodies composing it, by a theory of vortices.
  • (n.) Any one of numerous species of small Turbellaria belonging to Vortex and allied genera. See Illustration in Appendix.

Example Sentences:

  • (1) Arterial-type flows produced a pair of vortex sinks downstream of the branching port.
  • (2) However, the external muscle fibers of the ventricles ran clockwise from base to apex toward the center of the vortex, which had a striking resemblance to the normal rather than the mirror image pattern.
  • (3) She says that, while she stayed away from the more difficult ramifications of that upbringing, she nevertheless plunged right into the "hot quicksand" of the Arab-Israeli conflict, right down into the Biblical roots of Jewish-Muslim conflict in the story of Abraham, Hagar, Isaac and Ishmael (which she meditates upon in the opera's Hagar chorus), and into the vortex of questions about Israel's right to exist and what motivates terrorists.
  • (4) Nancy Curtin, the chief investment officer of Close Brothers Asset Management said: "The US economy didn't just grind to a halt in the first quarter – it hit reverse as the polar vortex took its toll.
  • (5) Electron microscopy and reactivation of infectivity by vortexing suggested that aggregation makes only a minor contribution to neutralization by IgG or IgM.
  • (6) This study employs classical inviscid fluid dynamics theory to investigate whether LV diastolic inflow volume and the size of the LV play a role in vortex ring formation.
  • (7) Azotobacter chroococcum (ATCC 7493) was grown in continuous culture with intense vortex aeration (stirring rate 1750 rpm) with up to 50% O2 in the gas phase.
  • (8) Vortex flow filtration (VFF) was used to concentrate viruses and dissolved DNA from freshwater and seawater samples taken in Florida, the Gulf of Mexico, and the Bahamas Bank.
  • (9) Specific modifications to the manual procedure include the use of serial vortex mixings in place of batchwise lateral shaking and the substitution of small (6 mL), disposable solid phase extraction columns driven by compressed gas for large (25 mL), gravity-fed, reusable glass columns.
  • (10) Flow separations also stimulate vortex formation and turbulent mixing at the downstream jet boundaries and thus may intensify blood damage by turbulent shear stresses.
  • (11) Both record, with power and sentient humanity, the vortex of war in our world today, and the millions these wars scatter and shatter across it, not least to Europe’s shores.
  • (12) This vortex, which persists into early systole, provides good washing of the VAD walls.
  • (13) It’s like you go through some crazy inter-dimensional vortex,” Barbe said.
  • (14) These vortexes were places where spiritual energy was at its highest point, where you could tap into the frequencies of the universe, where you could, by closing your eyes, start to change your life.
  • (15) After vortex-mixing and centrifugation, 30 microliters of 4 M K2HPO4 were added followed by gentle shaking.
  • (16) Excitation frequencies, based on vortex shedding, are estimated to be of the order 2-200 Hz, for the range of flow rates of the theoretical model.
  • (17) From September 1983 to March 1985, five patients who could not be weaned from extracorporeal circulation or who deteriorated in the recovery room have been treated with biventricular mechanical support using two vortex pumps, standard cannulas and tubing.
  • (18) This method is then used to study the formation of the sinus vortex and to confirm the predictions of the point vortex model with respect to the role of the vortex in valve closure.
  • (19) Several lines of evidence suggest that the phagocytic uptake depends, in part, upon the LDL receptor and not the acetyl-LDL receptor: 1) soluble, native LDL and beta-VLDL (but not acetyl-LDL) competed for uptake and degradation of LDL aggregates; 2) reductive methylation of LDL before vortexing reduced the effect of the aggregates on degradation and cholesterol esterification; 3) heparin, which inhibits binding of native LDL to its receptor, reduced the degradation of LDL aggregates.
  • (20) In contrast, partial heparin-less bypass (N = 5) using a centrifugal vortex pump was used after September 1988, and there were no haemorrhagic or paraplegic complications or mortality in this group.